feat(guix): conda

.bashrc

@@ -102,6 +102,7 @@ alias ls="exa --icons"
 alias ll="exa -lah --icons"
 alias q="exit"
 alias c="clear"
+alias ic="init_conda"
 # Aliases:1 ends here
 
 # [[file:Console.org::*Aliases][Aliases:2]]
@@ -111,6 +112,23 @@ if [[ ! -z "$SIMPLE" ]]; then
 fi
 # Aliases:2 ends here
 
+# [[file:Console.org::*Anaconda][Anaconda:1]]
+init_conda () {
+    __conda_setup="$('/home/pavel/.guix-extra-profiles/dev/dev/bin/conda' 'shell.bash' 'hook' 2> /dev/null)"
+    if [ $? -eq 0 ]; then
+        eval "$__conda_setup"
+    else
+        if [ -f "/home/pavel/.guix-extra-profiles/dev/dev/etc/profile.d/conda.sh" ]; then
+            . "/home/pavel/.guix-extra-profiles/dev/dev/etc/profile.d/conda.sh"
+        else
+            # export PATH="/home/pavel/Programs/miniconda3/bin:$PATH"
+            echo "what"
+        fi
+    fi
+    unset __conda_setup
+}
+# Anaconda:1 ends here
+
 # [[file:Console.org::*Starship prompt][Starship prompt:1]]
 if [[ -z "$SIMPLE" ]]; then
     eval "$(starship init bash)"

.config/fish/config.fish

@@ -11,8 +11,15 @@ alias ls="exa --icons"
 alias ll="exa -lah --icons"
 alias q="exit"
 alias c="clear"
+alias ic="init_conda"
 # Fish:2 ends here
 
+# [[file:../../Console.org::*Fish][Fish:3]]
+function init_conda
+    eval /home/pavel/.guix-extra-profiles/dev/dev/bin/conda "shell.fish" "hook" $argv | source
+end
+# Fish:3 ends here
+
 # [[file:../../Console.org::*Fish][Fish:4]]
 if ! test -n "$TMUX"; and ! test -n "$IS_EMACS";
     colorscript random

Console.org

@@ -296,6 +296,7 @@ alias ls="exa --icons"
 alias ll="exa -lah --icons"
 alias q="exit"
 alias c="clear"
+alias ic="init_conda"
 #+end_src
 
 #+begin_src bash
@@ -304,27 +305,27 @@ if [[ ! -z "$SIMPLE" ]]; then
     alias ll="ls -lah"
 fi
 #+end_src
-*** OFF (OFF) Anaconda
+*** Anaconda
 #+begin_quote
 managed by 'conda init' !!!
 #+end_quote
 Yeah, tell this to yourself
 
-#+begin_src bash :tangle no
+#+begin_src bash
-# >>> conda initialize >>>
+init_conda () {
-# !! Contents within this block are managed by 'conda init' !!
+    __conda_setup="$('/home/pavel/.guix-extra-profiles/dev/dev/bin/conda' 'shell.bash' 'hook' 2> /dev/null)"
-__conda_setup="$('/home/pavel/Programs/miniconda3/bin/conda' 'shell.bash' 'hook' 2> /dev/null)"
+    if [ $? -eq 0 ]; then
-if [ $? -eq 0 ]; then
+        eval "$__conda_setup"
-    eval "$__conda_setup"
-else
-    if [ -f "/home/pavel/Programs/miniconda3/etc/profile.d/conda.sh" ]; then
-        . "/home/pavel/Programs/miniconda3/etc/profile.d/conda.sh"
     else
-        export PATH="/home/pavel/Programs/miniconda3/bin:$PATH"
+        if [ -f "/home/pavel/.guix-extra-profiles/dev/dev/etc/profile.d/conda.sh" ]; then
+            . "/home/pavel/.guix-extra-profiles/dev/dev/etc/profile.d/conda.sh"
+        else
+            # export PATH="/home/pavel/Programs/miniconda3/bin:$PATH"
+            echo "what"
+        fi
     fi
-fi
+    unset __conda_setup
-unset __conda_setup
+}
-# <<< conda initialize <<<
 #+end_src
 *** Starship prompt
 #+begin_src bash
@@ -356,11 +357,10 @@ fish_vi_key_bindings
 #+end_src
 
 Anaconda
-#+begin_src fish :tangle no
+#+begin_src fish
-# >>> conda initialize >>>
+function init_conda
-# !! Contents within this block are managed by 'conda init' !!
+    eval /home/pavel/.guix-extra-profiles/dev/dev/bin/conda "shell.fish" "hook" $argv | source
-eval /home/pavel/Programs/miniconda3/bin/conda "shell.fish" "hook" $argv | source
+end
-# <<< conda initialize <<<
 #+end_src
 
 | Guix dependency |

Desktop.org

@@ -2032,12 +2032,23 @@ This section generates manifests for various desktop software that I'm using.
 | Category | Guix dependency |
 |----------+-----------------|
 | latex    | texlive         |
+** Dev
+| Category | Guix dependency |
+|----------+-----------------|
+| dev      | conda           |
 ** Manifests
 #+NAME: packages
 #+begin_src emacs-lisp :tangle no :var category=""
 (my/format-guix-dependencies category)
 #+end_src
 
+Dev
+#+begin_src scheme :tangle .config/guix/manifests/dev.scm :noweb yes
+(specifications->manifest
+ '(
+   <<packages("dev")>>))
+#+end_src
+
 Browsers
 #+begin_src scheme :tangle .config/guix/manifests/browsers.scm :noweb yes
 (specifications->manifest

Guix.org

@@ -382,10 +382,10 @@ And activate the required profiles. Again, downloading & building Emacs, Starshi
 
 Don't forget to install =JetBrainsMono Nerd Font=.
 * Misc software
-| Category | Guix dependency         |
+| Category | Guix dependency |
-|----------+-------------------------|
+|----------+-----------------|
-| system   | openvpn                 |
+| system   | openvpn         |
-| system   | python                  |
+| system   | python          |
 * Notes on installing software
 | Category | Guix dependency | Description                                        |
 |----------+-----------------+----------------------------------------------------|
@@ -393,6 +393,20 @@ Don't forget to install =JetBrainsMono Nerd Font=.
 | system   | glibc           | A lot of stuff, including ELF interpeter and ~ldd~ |
 ** flatpak
 As for now, the easiest way to install most of proprietary software is via flatpak. See the relevant section in [[file:Desktop.org][Desktop.org]].
+** conda
+[[https://docs.conda.io/en/latest/][conda]] is a package manager, which I use for managing various versions of Python & Node.js.
+
+It is packaged for GNU Guix, although the definition has its fair share of workarounds. It is almost surprising to see it work with all the C libraries and stuff. But there are still some problems.
+
+First, it's impossible to perform =conda init= to patch files like =.bashrc=, because the command is hell-bent on modifying =/gnu/store/=. So I do this manually, look for the =init_conda= procedures in [[file:Console.org][Console.org]].
+
+Second, base environment root is =/gnu/store=, so don't install anything there.
+
+Third, by default it tries to create envronments in =/gnu/store=. I think it's enough to create one environment like this to fix it:
+#+begin_src sh
+mkdir -p ~/.conda/envs
+conda create -p ~/.conda/envs/test
+#+end_src
 ** wakatime-cli
 | Note | Description           |
 |------+-----------------------|
@@ -402,44 +416,3 @@ Before I figure out how to package this for Guix:
 - Clone [[https://github.com/wakatime/wakatime-cli][the repo]]
 - Run ~go build~
 - Copy the binary to the =~/bin= folder
-
-** ActivityWatch
-| Note | Description           |
-|------+-----------------------|
-| TODO | Package this for Guix |
-
-The official binaries work just fine after some patching, except for the =aw-qt= binary.
-
-Properly building from source is more awkward, as there is poetry, which isn't oficially supported by Guix yet.
-
-The patching is as follows:
-
-- Get ELF interpeter patch from ~guix build glibc~, after which patch ELF interpeter path for the required binaries, e.g.:
-#+begin_src bash eval :no
-patchelf --set-interpreter /gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/lib/ld-linux-x86-64.so.2 aw-qt
-patchelf --set-interpreter /gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/lib/ld-linux-x86-64.so.2 aw-server/aw-server
-patchelf --set-interpreter /gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/lib/ld-linux-x86-64.so.2 aw-server-rust/aw-server-rust
-patchelf --set-interpreter /gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/lib/ld-linux-x86-64.so.2 aw-watcher-afk/aw-watcher-afk
-patchelf --set-interpreter /gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/lib/ld-linux-x86-64.so.2 aw-watcher-window/aw-watcher-window
-#+end_src
-
-Add libz to RPATH
-
-| Category | Guix dependency |
-|----------+-----------------|
-| system   | zlib            |
-
-#+begin_src bash eval :no
-patchelf --set-rpath /gnu/store/rykm237xkmq7rl1p0nwass01p090p88x-zlib-1.2.11/lib/ aw-qt
-patchelf --set-rpath /gnu/store/rykm237xkmq7rl1p0nwass01p090p88x-zlib-1.2.11/lib/ aw-server/aw-server
-patchelf --set-rpath /gnu/store/rykm237xkmq7rl1p0nwass01p090p88x-zlib-1.2.11/lib/ aw-server-rust/aw-server-rust
-patchelf --set-rpath /gnu/store/rykm237xkmq7rl1p0nwass01p090p88x-zlib-1.2.11/lib/ aw-watcher-afk/aw-watcher-afk
-patchelf --set-rpath /gnu/store/rykm237xkmq7rl1p0nwass01p090p88x-zlib-1.2.11/lib/ aw-watcher-window/aw-watcher-window
-#+end_src
-
-As aw-qt doesn't work properly, and the only thing it does is makes a tray icon anyhow, here is a script to launch the required components:
-#+begin_src bash :tangle ./bin/aw-start
-~/bin/activitywatch/aw-server/aw-server &
-~/bin/activitywatch/aw-watcher-afk/aw-watcher-afk &
-~/bin/activitywatch/aw-watcher-window/aw-watcher-window &
-#+end_src