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feat(*): conda -> micromamba

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This commit is contained in:
Pavel Korytov 2023-06-18 15:12:25 +03:00
parent f588e1a9fa
commit 609fc84e43
11 changed files with 93 additions and 86 deletions
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31
.bashrc
View file

@ -112,9 +112,9 @@ alias ls="exa --icons"
alias ll="exa -lah --icons"
alias q="exit"
alias c="clear"
alias ci="init_conda"
alias ca="conda activate"
alias cii="export INIT_CONDA=true && init_conda"
alias ci="init_mamba"
alias ca="micromamba activate"
alias cii="export INIT_MAMBA=true && init_mamba"
# Aliases:1 ends here
# [[file:Console.org::*Aliases][Aliases:2]]
@ -124,26 +124,27 @@ if [[ ! -z "$SIMPLE" ]]; then
fi
# Aliases:2 ends here
# [[file:Console.org::*Anaconda][Anaconda:1]]
init_conda () {
__conda_setup="$('/home/pavel/.guix-extra-profiles/dev/dev/bin/conda' 'shell.bash' 'hook' 2> /dev/null)"
# [[file:Console.org::*Micromamba][Micromamba:1]]
init_mamba () {
export MAMBA_EXE="/gnu/store/w0rrglxs2247nr4wawrh5dylisjra1q4-micromamba-bin-1.4.4-0/bin/micromamba";
export MAMBA_ROOT_PREFIX="/home/pavel/micromamba";
__mamba_setup="$("$MAMBA_EXE" shell hook --shell bash --prefix "$MAMBA_ROOT_PREFIX" 2> /dev/null)"
if [ $? -eq 0 ]; then
eval "$__conda_setup"
eval "$__mamba_setup"
else
if [ -f "/home/pavel/.guix-extra-profiles/dev/dev/etc/profile.d/conda.sh" ]; then
. "/home/pavel/.guix-extra-profiles/dev/dev/etc/profile.d/conda.sh"
if [ -f "/home/pavel/micromamba/etc/profile.d/micromamba.sh" ]; then
. "/home/pavel/micromamba/etc/profile.d/micromamba.sh"
else
# export PATH="/home/pavel/Programs/miniconda3/bin:$PATH"
echo "what"
export PATH="/home/pavel/micromamba/bin:$PATH" # extra space after export prevents interference from conda init
fi
fi
unset __conda_setup
unset __mamba_setup
}
if [[ ! -z "$INIT_CONDA" ]]; then
init_conda
if [[ ! -z "$INIT_MAMBA" ]]; then
init_mamba
fi
# Anaconda:1 ends here
# Micromamba:1 ends here
# [[file:Console.org::*Starship][Starship:1]]
if [[ -z "$SIMPLE" && "$TERM" != "dumb" ]]; then

3
.config/alacritty/alacritty.yml
View file

@ -34,13 +34,12 @@ colors:
Cyan: '#a3f7ff'
White: '#ffffff'
background_opacity: 0.80
window:
padding:
x: 0
y: 0
dynamic_padding: true
opacity: 0.80
key_bindings:
- { key: Paste, action: Paste }

31
.config/fish/config.fish
View file

@ -13,10 +13,9 @@ alias ls="exa --icons"
alias ll="exa -lah --icons"
alias q="exit"
alias c="clear"
alias ci="init_conda"
alias ca="conda activate"
alias cii="export INIT_CONDA=true && init_conda"
alias cad="conda activate (basename (pwd))"
alias ci="init_mamba"
alias ca="micromamba activate"
alias cii="export INIT_MAMBA=true && init_mamba"
# Fish:2 ends here
# [[file:../../Console.org::*Fish][Fish:3]]
@ -29,21 +28,23 @@ end
set fish_greeting
# Fish:4 ends here
# [[file:../../Console.org::*Anaconda][Anaconda:1]]
function init_conda
eval /home/pavel/.guix-extra-profiles/dev/dev/bin/conda "shell.fish" "hook" $argv | source
# [[file:../../Console.org::*Micromamba][Micromamba:1]]
function init_mamba
set -gx MAMBA_EXE "/gnu/store/w0rrglxs2247nr4wawrh5dylisjra1q4-micromamba-bin-1.4.4-0/bin/micromamba"
set -gx MAMBA_ROOT_PREFIX "/home/pavel/micromamba"
$MAMBA_EXE shell hook --shell fish --prefix $MAMBA_ROOT_PREFIX | source
end
if test -n "$INIT_CONDA";
init_conda
if test -n "$INIT_MAMBA";
init_mamba
end
# Anaconda:1 ends here
# Micromamba:1 ends here
# [[file:../../Console.org::*Anaconda][Anaconda:2]]
if test -n "$EMACS_CONDA_ENV";
conda activate $EMACS_CONDA_ENV
end
# Anaconda:2 ends here
# [[file:../../Console.org::*Micromamba][Micromamba:2]]
# if test -n "$EMACS_CONDA_ENV";
# conda activate $EMACS_CONDA_ENV
# end
# Micromamba:2 ends here
# [[file:../../Console.org::*Colors][Colors:1]]
set fish_color_command cyan

2
.config/guix/channels.scm
View file

@ -2,7 +2,7 @@
(cons*
(channel
(name 'channel-q)
(url "file:///home/pavel/Code/channel-q"))
(url "file:///home/pavel/_channel-q"))
(channel
(name 'flat)
(url "https://github.com/flatwhatson/guix-channel.git")

3
.config/guix/manifests/console.scm
View file

@ -1,7 +1,8 @@
(specifications->manifest
'(
"ncdu"
"megacmd"
"jless"
"jless-bin"
"direnv"
"glibc-locales"
"git-lfs"

2
.config/guix/manifests/dev.scm
View file

@ -21,4 +21,4 @@
"postgresql"
"docker-compose"
"pandoc"
"conda"))
"micromamba-bin"))

23
.emacs.d/init.el
View file

@ -82,24 +82,11 @@
(lambda (data)
(message "%f Gb" (/ (float data) 1024 1024)))))
(use-package conda
:straight t
:if (executable-find "conda")
(use-package micromamba
:straight (:local-repo "~/10-19 Code/12 My Emacs Packages/12.12 micromamba.el")
:if (executable-find "micromamba")
:config
(setq conda-anaconda-home (string-replace "/bin/conda" "" (executable-find "conda")))
(setq conda-env-home-directory (expand-file-name "~/.conda/"))
(setq conda-env-subdirectory "envs")
(advice-add 'conda-env-activate :after
(lambda (&rest _)
(setenv "EMACS_CONDA_ENV" conda-env-current-name)
(setenv "INIT_CONDA" "true")))
(advice-add 'conda-env-deactivate :after
(lambda (&rest _)
(setenv "EMACS_CONDA_ENV" nil)
(setenv "INIT_CONDA" nil)))
(unless (getenv "CONDA_DEFAULT_ENV")
(conda-env-activate "general")))
(micromamba-activate "general"))
(setq custom-file (concat user-emacs-directory "custom.el"))
(load custom-file 'noerror)
@ -6019,7 +6006,7 @@ base toot."
(defun my/ement-room-send-reaction (key position)
(interactive (list
(completing-read "Add reaction: " telega-emoji-reaction-list)
(completing-read "Add reaction: " (append telega-emoji-reaction-list '("👋")))
(point)))
(ement-room-send-reaction key position))

61
Console.org
View file

@ -374,9 +374,9 @@ alias ls="exa --icons"
alias ll="exa -lah --icons"
alias q="exit"
alias c="clear"
alias ci="init_conda"
alias ca="conda activate"
alias cii="export INIT_CONDA=true && init_conda"
alias ci="init_mamba"
alias ca="micromamba activate"
alias cii="export INIT_MAMBA=true && init_mamba"
#+end_src
#+begin_src bash
@ -385,32 +385,36 @@ if [[ ! -z "$SIMPLE" ]]; then
alias ll="ls -lah"
fi
#+end_src
*** Anaconda
*** Micromamba
I've moved from conda to [[https://github.com/mamba-org/mamba][micromamba]] because it's faster.
#+begin_quote
managed by 'conda init' !!!
managed by 'mamba init' !!!
#+end_quote
Yeah, tell this to yourself
#+begin_src bash
init_conda () {
__conda_setup="$('/home/pavel/.guix-extra-profiles/dev/dev/bin/conda' 'shell.bash' 'hook' 2> /dev/null)"
init_mamba () {
export MAMBA_EXE="/gnu/store/w0rrglxs2247nr4wawrh5dylisjra1q4-micromamba-bin-1.4.4-0/bin/micromamba";
export MAMBA_ROOT_PREFIX="/home/pavel/micromamba";
__mamba_setup="$("$MAMBA_EXE" shell hook --shell bash --prefix "$MAMBA_ROOT_PREFIX" 2> /dev/null)"
if [ $? -eq 0 ]; then
eval "$__conda_setup"
eval "$__mamba_setup"
else
if [ -f "/home/pavel/.guix-extra-profiles/dev/dev/etc/profile.d/conda.sh" ]; then
. "/home/pavel/.guix-extra-profiles/dev/dev/etc/profile.d/conda.sh"
if [ -f "/home/pavel/micromamba/etc/profile.d/micromamba.sh" ]; then
. "/home/pavel/micromamba/etc/profile.d/micromamba.sh"
else
# export PATH="/home/pavel/Programs/miniconda3/bin:$PATH"
echo "what"
export PATH="/home/pavel/micromamba/bin:$PATH" # extra space after export prevents interference from conda init
fi
fi
unset __conda_setup
unset __mamba_setup
}
if [[ ! -z "$INIT_CONDA" ]]; then
init_conda
if [[ ! -z "$INIT_MAMBA" ]]; then
init_mamba
fi
#+end_src
*** Starship
#+begin_src bash
if [[ -z "$SIMPLE" && "$TERM" != "dumb" ]]; then
@ -450,7 +454,6 @@ Enable vi keybindings & aliases. The alias syntax is the same as in bash, so it'
fish_vi_key_bindings
<<shell-aliases>>
alias cad="conda activate (basename (pwd))"
#+end_src
@ -469,23 +472,25 @@ Suppress fish greeting
#+begin_src fish
set fish_greeting
#+end_src
** Anaconda
First, a function to initialize anaconda.
** Micromamba
First, a function to initialize micromamba.
#+begin_src fish
function init_conda
eval /home/pavel/.guix-extra-profiles/dev/dev/bin/conda "shell.fish" "hook" $argv | source
function init_mamba
set -gx MAMBA_EXE "/gnu/store/w0rrglxs2247nr4wawrh5dylisjra1q4-micromamba-bin-1.4.4-0/bin/micromamba"
set -gx MAMBA_ROOT_PREFIX "/home/pavel/micromamba"
$MAMBA_EXE shell hook --shell fish --prefix $MAMBA_ROOT_PREFIX | source
end
if test -n "$INIT_CONDA";
init_conda
if test -n "$INIT_MAMBA";
init_mamba
end
#+end_src
Then, check if launched from Emacs with environment activated.
#+begin_src fish
if test -n "$EMACS_CONDA_ENV";
conda activate $EMACS_CONDA_ENV
end
# if test -n "$EMACS_CONDA_ENV";
# conda activate $EMACS_CONDA_ENV
# end
#+end_src
** Colors
Fish seems to have hardcoded colorcodes in some color settings. I set these to base16 colors, so they would match Xresources.
@ -776,13 +781,12 @@ colors:
Cyan: '<<get-xrdb(color="color14")>>'
White: '<<get-xrdb(color="color15")>>'
background_opacity: 0.80
window:
padding:
x: 0
y: 0
dynamic_padding: true
opacity: 0.80
key_bindings:
- { key: Paste, action: Paste }
@ -831,8 +835,9 @@ key_bindings:
| git-lfs | |
| glibc-locales | |
| direnv | |
| jless | JSON viewer |
| jless-bin | JSON viewer |
| megacmd | mega.nz client |
| ncdu | disk usage analyzer |
** ripgrep config
Occasionally I can't exclude certain files from ripgrep via the VCS settings, so here is a simple config to ignore certain files globally.

2
Desktop.org
View file

@ -3355,7 +3355,7 @@ This section generates manifests for various desktop software that I'm using.
** Dev
| Category | Guix dependency | Disabled |
|----------+-------------------+----------|
| dev | conda | |
| dev | micromamba-bin | |
| dev | pandoc | |
| dev | docker-compose | |
| dev | postgresql | |

19
Emacs.org
View file

@ -217,7 +217,7 @@ I have some concerns that =ps -o rss= may be unrepresentative because of [[https
(lambda (data)
(message "%f Gb" (/ (float data) 1024 1024)))))
#+end_src
** Anaconda
** OFF Anaconda
[[https://www.anaconda.com/][Anaconda]] is a free package and environment manager. I currently use it to manage multiple versions of Python and Node.js. Take a look at [[file:Guix.org::*conda][the corresponding entry]] in the Guix config for details about using it on Guix.
The following code uses the =conda= package to activate the base environment on startup if Emacs is launched outside the environment.
@ -228,12 +228,13 @@ References:
- [[https://docs.anaconda.com/][Anaconda docs]]
- [[https://github.com/necaris/conda.el][conda.el repo]]
#+begin_src emacs-lisp
#+begin_src emacs-lisp :tangle no
(use-package conda
:straight t
:if (executable-find "conda")
:config
(setq conda-anaconda-home (string-replace "/bin/conda" "" (executable-find "conda")))
(setq conda--executable-path (executable-find "micromamba"))
(setq conda-env-home-directory (expand-file-name "~/.conda/"))
(setq conda-env-subdirectory "envs")
@ -248,6 +249,18 @@ References:
(unless (getenv "CONDA_DEFAULT_ENV")
(conda-env-activate "general")))
#+end_src
** Micromamba
[[https://github.com/mamba-org/mamba][mamba]] is a faster alternative to [[https://www.anaconda.com/][Anaconda]], a package and environment manager. =micromamba= is a tiny version that provides a subset of mamba commands.
=micromamba.el= is my package to interact with the latter.
#+begin_src emacs-lisp
(use-package micromamba
:straight (:local-repo "~/10-19 Code/12 My Emacs Packages/12.12 micromamba.el")
:if (executable-find "micromamba")
:config
(micromamba-activate "general"))
#+end_src
** Config files
*** Custom file location
By default, =custom= writes stuff to =init.el=, which is somewhat annoying. The following makes it write to a separate file =custom.el=
@ -1225,7 +1238,7 @@ Setting up quick access to various completions.
"" '(:which-key "various completions")'
;; "b" 'counsel-switch-buffer
"b" 'persp-ivy-switch-buffer
"e" 'conda-env-activate
"e" 'micromamba-activate
"f" 'project-find-file
"c" 'counsel-yank-pop
"a" 'counsel-rg

2
Guix.org
View file

@ -127,7 +127,7 @@ References:
(cons*
(channel
(name 'channel-q)
(url "file:///home/pavel/Code/channel-q"))
(url "file:///home/pavel/_channel-q"))
(channel
(name 'flat)
(url "https://github.com/flatwhatson/guix-channel.git")